[Statistik & Datascience]: PDZ-motif containing protein-protein interactions: Force-directed layout graph using Mike Bostock’s D3 library and javascript. The data is based on: [1] Pdzbase network dataset -- KONECT, October 2016. [ link to PDZ ] [2] Thijs Beuming, Lucy Skrabanek, Masha Y. Niv, Piali Mukherjee, and Harel Weinstein. PDZBase: A protein--protein interaction database for PDZ-domains. Bioinformatics, 21(6):827--828, 2005.
[Bioinformatik]: Feeding network in a lake: Dynamic chord diagram, javascript using the D3 library by Mike Bostock. The data is taken from: Almunia, J., G. Basterretxea, J. Aristegui, and R.E. Ulanowicz. (1999) Benthic- Pelagic switching in a coastal subtropical lagoon. Estuarine, Coastal and Shelf Science 49:363-384.
[Medikamentenentwicklung]: Relation between HIV prevalence and GDP in several countries: Dynamic bubble plot using javascript and D3 from Mike Bostock. Data are taken from AIDSVu http://aidsvu.org/ and the world bank http://data.worldbank.org/ websites.
[Data Visualization&Layout]:
[Kurse&Lehre]:Dynamic sunburst plot showing the first 10 medical subject headings (MESH) with 4 subcategories for the 2015 catalogue from the National Library of Medicine (NLM) extracted from MESH. Inspired by an example from Stephen Thomas‘ book „Data visualization with JavaScript“, 2015, ISBN: 978-1-59327-605-8 using javascript and the D3.js library from Mike Bostock.
[Services]: Small insets in the respective boxes show the following data (from left to right and top to bottom): - Coverage saturation plot for 4 different single cell amplification techniques - Sliding window coverage plot of 4 single cell amplification techniques - Kaplan-Meier plot showing survival data from the following trial: JA Laurie, CG Moertel, TR Fleming, HS Wieand, JE Leigh, J Rubin, GW McCormack, JB Gerstner, JE Krook and J Malliard. Surgical adjuvant therapy of large-bowel carcinoma: An evaluation of levamisole and the combination of levamisole and fluorouracil; The North Central Cancer Treatment Group and the Mayo Clinic; J Clinical Oncology, 7:1447-1456, 1989. - illustration of viral sequence matching human epitope sequence - inforgraphic about phylogenetic trees
